4.95 from 210 votes

Sourdough Chocolate Chip Cookies

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Servings: 24 cookies

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These Sourdough Chocolate Chip Cookies are made with brown butter, semisweet chocolate, and a sprinkle of sea salt. They have an incredible flavor and are perfect for using up sourdough discard! Recipe includes a how-to video!

Sourdough discard chocolate chip cookies arranged over a wood surface.

Sourdough Discard Chocolate Chip Cookies

Never did I ever think this internet space of mine would host a recipe as… interesting… as sourdough chocolate chip cookies. However, after falling headfirst into the world of sourdough baking, I’ve become obsessed with finding new ways to use up my discard, and it wasn’t long before my love of desserts and my love of sourdough merged.

Today’s recipe blends these two worlds beautifully, and it surprised me how quickly I fell head over heels for this recipe. In fact, it’s my new favorite chocolate chip cookie, yes, even more than my go-to best chocolate chip cookies–and I never thought I’d find a cookie that topped those. If you love that recipe, just wait until you try this one.

The flavor is unparalleled, rich and deep, intense and chocolatey. Top everything off with a sprinkle of sea salt and it’s true cookie bliss.

Overhead view of chocolate chip cookies made with sourdough discard.

When developing this recipe I knew that simply adding sourdough discard to a standard chocolate chip cookie dough wouldn’t work. At least, it wouldn’t yield the chewy, flavorful cookie I was seeking. Adding that much liquid was bound to result in too-thick, cakey cookies, which I definitely didn’t want.

I took a few notes from my experience with developing other high-liquid recipes (like my pumpkin cookies) and creatively reduced the liquid and water content in a few ways. We use only egg yolks (no whites) and brown the butter (to cook out the excess water), which takes the cookie to even higher heights. The end result is oft and chewy cookies that aren’t at all cakey and stay soft for days!

What makes these cookies so amazing?

  • Sourdough discard adds unique depth and wonderful flavor (it’s not at all sour here) that’s hard to put your finger on, but so good. Like… so good.
  • Browned butter imparts a rich, nutty taste that is unparalleled.
  • Chopped chocolate and sea salt accents the other flavors perfectly.

What You Need

Overhead view of ingredients including butter, sourdough discard, eggs, chocolate bars, and more.

Here are the key ingredients in these sourdough discard chocolate chip cookies:

  • Sourdough discard. If you use my sourdough starter recipe, the amount you will discard there is the exact same amount needed here today. Saving sourdough discard for other recipes (like my sourdough pancakes!) is a wonderful way to reduce food waste (and a great excuse to eat more cookies)!
  • Butter. To compensate for the discard and reduce the water content in the dough, we’ll brown our butter. This extra step creates an AMAZING flavor as well, so it’s worth it. If you’ve never browned butter before, I have a post on how to brown butter that might be helpful for you.
  • Egg yolks. Discarding the egg whites and just using the yolks also helps to reduce the water in our cookie dough.
  • Chocolate. Semisweet or 60% cacao chocolate baking bars are my preference in this recipe. You can use whatever type of chocolate you prefer though, such as semisweet, milk, or dark chocolate. Despite these being sourdough discard chocolate chip cookies, I recommend buying bars and chopping them yourself (like I do with my brown butter chocolate chip cookies). This allows the chocolate to distribute beautifully through the cookies and melt more than regular chocolate chips would. It just also adds to that gourmet feel! Yes, of course actual chips will work instead, but I do recommend you try them with chopped chocolate at least once.
  • Vanilla extract. This also adds depth of flavor to the cookies. If you have homemade vanilla, now is the time to whip it out.
  • Sea salt. Adding a sprinkle of flaky sea salt on top of the baked cookies enhances the sweet and savory flavors, creating a delightful contrast.

SAM’S TIP: I think these sourdough discard chocolate chip cookies taste best when the dough has had quite a bit of time to chill; in fact, I like to let mine sit overnight before scooping and baking. Technically the dough will be firm enough that you can bake it right away (the cookies would just be a smidge flatter), but if you have the patience to let the flavor develop, you will be rewarded with amazing cookies!

Remember, this is just an overview of the ingredients I used and why. For the full recipe please scroll down to the bottom of the post!

How to Make Sourdough Chocolate Chip Cookies

Collage of four photos showing chocolate chip cooking doing being prepared with brown butter.
  1. Brown the butter – Cook the butter over medium low heat until it melts, then increase the heat to medium. Stir constantly as the butter bubbles and pops (it’s the most pleasant sound in the world). Once the popping slows, look for golden brown specks forming in the bottom of the pan. Remove from the heat, pour into a heatproof bowl, and let cool completely.
  2. Add the wet ingredients – Add the sugars, egg yolks, and vanilla to the cooled butter, then stir in the sourdough discard.
  3. Add the dry ingredients – Whisk together the dry ingredients in a separate bowl, then gradually stir them into the wet ingredients.
  4. Chocolate and chill – Add the chopped chocolate and fold it into the dough until incorporated. Cover the bowl with plastic wrap and place in the fridge to chill for at least 30 minutes (I like to let mine chill overnight for the best flavor).
Collage of two photos showing cookie dough being scooped onto a baking sheet and baked.
  1. Scoop and bake – Roll 1 ½ tablespoon sized cookie dough balls between your palms before placing on a parchment lined baking sheet. Bake for 350F for 10-12 minutes, or until the edges start to turn golden brown.
  2. Salt and enjoy! Sprinkle the warm cookies with sea salt and let them cool completely on their baking sheets before enjoying.

SAM’S TIP: Never put cookie dough on a hot cookie sheet! Doing this can cause your dough to spread and result in super thin cookies. If you don’t have multiple cookie sheets, let your dough chill in the fridge in between batches while your cookie sheets cool down.

Overhead view of chocolate chip cookies made with sourdough discard on a baking sheet after baking.

Frequently Asked Questions

Can I make the dough in advance?

Yes! In fact, I think these sourdough chocolate chip cookies tastes best after chilling the dough overnight. You can make this dough up to 4 days in advance, just note that if you do chill it longer than 60 minutes, it will be a bit tough to scoop at first (just let it sit at room temperature until scoopable).

What does sourdough do in cookies?

I developed these sourdough discard chocolate chip cookies as a way to 1) use my sourdough discard instead of discarding it and 2) create an incredibly flavored cookie that’s a bit different from the norm.

No matter the recipe type, sourdough discard imparts flavor and also has some nutritional benefits too. That’s not to say these cookies should be considered health food though!

Can I freeze this cookie dough?

Yes! Follow the chilling step first, then freeze according to the instructions for drop cookies in my how to freeze cookie dough post.

Sourdough chocolate cookies on a cookie sheet after baking.

I seriously can’t wait for you to try these!

Enjoy!

Let’s bake together! I’ll be walking you through all the steps in my written recipe and video below! If you try this recipe, be sure to tag me on Instagram, and you can also find me on YouTube and Facebook

Sourdough chocolate cookies on a cookie sheet after baking.
4.95 from 210 votes

Sourdough Chocolate Chip Cookies

These sourdough chocolate chip cookies are made with brown butter, semisweet chocolate, and a sprinkle of sea salt. They have an incredible flavor and are perfect for using up sourdough discard!
Recipe includes a how-to video!
Prep: 15 minutes
Cook: 10 minutes
Chilling Time: 30 minutes
Servings: 24 cookies
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Ingredients

  • 1 cup (226 g) unsalted butter
  • 1 cup (200 g) light brown sugar, firmly packed
  • cup (133 g) granulated sugar
  • 2 large egg yolks, room temperature preferred
  • 1 ½ teaspoons vanilla extract
  • cup (140 g) sourdough discard
  • 2 ¾ cup (340 g) all-purpose flour
  • 1 teaspoon baking powder
  • 1 teaspoon baking soda
  • ¾ teaspoon salt
  • 1 ½ cups (255 g) semisweet chocolate chips or 6 oz chopped semisweet or dark chocolate bar
  • Flaky sea salt, for sprinkling

Instructions 

  • Brown the butter. In a saucepan, melt butter over medium-low heat. Increase heat to medium and cook, stirring constantly. Butter will sizzle and pop. Once popping slows or stops and you notice the butter is beginning to turn golden brown (there will be brown flecks on the bottom of your pan) immediately remove from heat. Pour into a large heatproof mixing bowl and allow to cool until no longer warm to the touch before proceeding.
    1 cup (226 g) unsalted butter
  • Once butter has cooled, add sugars, eggs yolks, and vanilla extract and stir until well-combined.
    1 cup (200 g) light brown sugar, ⅔ cup (133 g) granulated sugar, 2 large egg yolks, 1 ½ teaspoons vanilla extract
  • Add sourdough discard and mix well, until fully incorporated.
    ⅔ cup (140 g) sourdough discard
  • In a separate bowl, whisk together the all-purpose flour, baking powder, baking soda, and salt.
    2 ¾ cup (340 g) all-purpose flour, 1 teaspoon baking powder, 1 teaspoon baking soda, ¾ teaspoon salt
  • Gradually add the dry ingredients to the wet, stirring until thoroughly combined.
  • Use a spatula to fold in chopped chocolate until well incorporated.
    1 ½ cups (255 g) semisweet chocolate chips or 6 oz chopped semisweet or dark chocolate bar
  • Cover with plastic wrap and chill for at least 30-60 minutes (or, my preference, overnight).
  • Once dough is ready to bake, preheat oven to 350F (175C) and line a baking sheet with parchment paper.
  • Scoop chilled dough into 1 ½ Tablespoon-sized balls, for neat, uniform cookies roll between your palms to make them round. Place on prepared baking sheet, spacing cookies at least 2 inches apart.
  • Bake for 10-12 minutes, until edges are beginning to turn golden brown (centers will still be soft and may appear slightly underdone).
  • Within several minutes of removing cookies from oven, sprinkle all over with flaky sea salt.
    Flaky sea salt
  • Allow cookies to cool completely on baking sheet before removing and enjoying.

Notes

Storing

Store cooled cookies in an airtight container at room temperature for up to a week.

Nutrition

Serving: 1cookie | Calories: 253kcal | Carbohydrates: 33g | Protein: 3g | Fat: 13g | Saturated Fat: 8g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 3g | Trans Fat: 0.3g | Cholesterol: 37mg | Sodium: 137mg | Potassium: 96mg | Fiber: 1g | Sugar: 19g | Vitamin A: 264IU | Calcium: 33mg | Iron: 2mg

Nutrition information is automatically calculated, so should only be used as an approximation.

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4.95 from 210 votes (34 ratings without comment)

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463 Comments

  1. Heidi says:

    4 stars
    These were wonderful. I did add a teaspoon of espresso powder to the butter while it was cooling and a 1/4 teaspoon of cayenne. Thank you for sharing your culinary secrets! I also top with 3-4 chips right when they come out of the oven for looks and a wee bit more chocolate. 🙂

  2. Phyllis Woolsey says:

    5 stars
    This was a great recipe that ended up tasting so yummy and was easy to understand and easy to make!!

  3. Shawna says:

    5 stars
    This recipe is🔥!
    love the format of it too. nothing worse than scrolling back and forth from instructions to ingredient list..!
    this is definitely a new permanent recipe in our house!

  4. Jessica Sullivan says:

    5 stars
    made these twice in the last 3 days… they are a hit. As if my life wasn’t already ruined by sourdough… now these cookies have entered and destroyed all hope. how can I possibly venture over to the worst cookies recipe? can it get any worse?

    (so actually it’s not that bad, my starter is well under control and spends at least half of its life snoozing in my fridge! but it crawls out a little too often for my good!)

    1. Sam says:

      🤣 I’m so glad everything has been such a hit. 🙂

  5. Jennifer says:

    5 stars
    This recipe turned out amazing and taste like fancy bakery gourmet cookies! I’m fairly new to sourdough bread making/using discard and the instructions were very easy to follow with helpful hints. (Like how to brown butter properly which I had never done!). I’ll be trying more of your sourdough recipes for sure!!

  6. Ashley says:

    Could I sub the sugar for honey?

    1. Sam says:

      Hi Ashley! I am not sure how it would work, you would likely need other alterations. If coconut sugar is an option, I think that could work. 🙂

  7. Heather says:

    5 stars
    These are amazing! I use coconut sugar instead of the brown and white sugar and they turn out great every time.

    1. Sam says:

      I’m so glad you enjoyed them, Heather! Thank you so much for the feedback using coconut sugar. I’m glad to hear it worked well. 🙂

  8. Taylor says:

    5 stars
    Delicious! Do you know if you can freeze the dough and bake them later on?

    1. Sam says:

      Hi Taylor! I haven’t personally frozen the dough, but I don’t think you will have any issues doing so. 🙂

  9. Rachel says:

    5 stars
    These turned out amazing! I followed the recipe exactly other than I added all brown sugar instead of brown and white. This is my second time making sourdough chocolate chip cookies and this recipe is by far the better of the two!

    Question! They were a bit greasy. Is this because of something I might’ve done? Or just the nature of having two sticks of butter in the recipe? Do you have any tips to help them not turn out so greasy?

    Thanks!

    1. Sam says:

      Hi Rachel! Adding the extra brown sugar adds a little moisture which might contribute to this. If the bottoms of your cookies are greasy, one thing to do to help is to let the cookies cool on the baking sheet for 5 minutes and then remove to a cooling rack. Another thing to keep watch for is the temperature of your butter. If your butter is too warm when you use it, it could also contribute to the greasiness. I hope this helps! I’m glad you are enjoying the cookies. 🙂

    2. virginia says:

      can i ask which recipe was the other one you tried? I tried an amazing recipe and they were SO good, but reading this recipe I want to give it a try… I am curious if we both tried the same one for our first?

      1. Rachel says:

        Yeah! I tired Farmhouse on Boones recipe. I love her recipes as well. However, she didn’t brown the butter and she used the whole egg instead of egg yolks. Therefore the cookies turned out more cake like and less chewy. With this recipe, having browned the butter, and only using the egg yolk, it turned out a lot nicer texture wise!

  10. Breena Lang says:

    Can I use 130g of discard?

    1. Sam says:

      Hi Breena! I wouldn’t recommend using less, but if it’s all I had I would probably give it a try. I just can’t say for sure how they will turn out.

  11. Kim says:

    5 stars
    These turned out great! My husband said they taste like they came from a fancy bakery. This will definitely be my new go to chocolate chip cookie recipe. I will be making the sourdough pizza crust tomorrow. Can’t wait!

    1. Sam says:

      I’m so glad everyone enjoyed them so much, Kim! 🙂

  12. Amy says:

    They spread much more and didn’t have all the “bubble” or texture when I baked them after freezing versus when I baked them immediately. Is that right? Or am I freezing wrong?

    1. Sam says:

      Hi Amy! So they baked fine initially then after freezing they spread? That’s very odd, cookies usually spread less after freezing so I am perplexed!

    2. Alex says:

      I had the same experience! First of all these are one of the best chocolate chip cookie recipes I’ve ever made. I found that when I baked them right after making the dough and then after refrigerating for just one night that the cookies were at their best. They looked like the ones in the pictures and had all the cracks and chewy texture etc.

      One thing I found interesting was that the cookies did not bake this way after letting the dough rest in the fridge for 2-3 days. After baking when dough rested for 2-3 days the cookies lost all texture and didn’t look as pictured above. This is usually not the case when you let cookie dough rest as normally it gets better with time. I’m guessing it had something to do with the fact that it was made with sourdough discard vs regular cookies.

      1. Randi says:

        Can one freeze already baked cookies ?

      2. Sam says:

        Sure thing. 🙂

  13. Erin A says:

    5 stars
    I’ve made these and love them!
    I’m wanting to add ground up nuts but don’t know how much I should add. Any suggestions would be great.

    1. Sam says:

      Hi Erin! Ground up nuts could dry out the dough and make it a bit crumbly. I don’t have a good guess for the amount. Honestly, it’s just something you will have to eyeball. Let me know how it goes. 🙂

  14. Stephanie says:

    I am new to sourdough and am on day 6 of making my starter.
    Very excited to use it so have been looking at recipes.
    Forgive my ignorance but when you say “discard” do you literally mean instead of trash, you bake with it, as in— the part you are *not* feeding that you are putting in the cookies?
    (so it doesn’t need to be fed first?)

    1. Sam says:

      Hi Stephanie! That is correct! Instead of throwing that part away you can use it to make things. 🙂

      1. Stephanie Genovese says:

        Thanks for your quick reply. I made these cookies and they are fantastic!
        Yum. I may also have to try your Worst Cookies, but it may be difficult to risk a different recipe since these are so amazing!
        As I said, I am new to sourdough. I am excited to see sourdough discard recipes because the waste is harsh reality.

  15. Esther B. says:

    HIW DOES ONE MAKE SOURDOUGH DISGARD

    1. Sam says:

      Hi Esther! Here is my sourdough starter recipe that you will need. 🙂