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    Home » Recipes » Desserts

    Sourdough Chocolate Chip Cookies

    Updated: January 23, 2024 by Sam Merritt • 451 Comments

    This post may contain affiliate links. As an Amazon Associate I earn from qualifying purchases. Please read my disclosure policy.
    Jump to Recipe Jump to Video
    collage of sourdough chocolate chip cookies, top image is a close up cookies, bottom image photographed further away

    These Sourdough Chocolate Chip Cookies are made with brown butter, semisweet chocolate, and a sprinkle of sea salt. They have an incredible flavor and are perfect for using up sourdough discard! Recipe includes a how-to video!

    Sourdough discard chocolate chip cookies arranged over a wood surface.

    Sourdough Discard Chocolate Chip Cookies

    Never did I ever think this internet space of mine would host a recipe as… interesting… as sourdough chocolate chip cookies. However, after falling headfirst into the world of sourdough baking, I’ve become obsessed with finding new ways to use up my discard, and it wasn’t long before my love of desserts and my love of sourdough merged.

    Today’s recipe blends these two worlds beautifully, and it surprised me how quickly I fell head over heels for this recipe. In fact, it’s my new favorite chocolate chip cookie, yes, even more than my go-to best chocolate chip cookies–and I never thought I’d find a cookie that topped those. If you love that recipe, just wait until you try this one.

    The flavor is unparalleled, rich and deep, intense and chocolatey. Top everything off with a sprinkle of sea salt and it’s true cookie bliss.

    Overhead view of chocolate chip cookies made with sourdough discard.

    It’s not as simple as just adding discard to any old cookie recipe

    When developing this recipe I knew that simply adding sourdough discard to a standard chocolate chip cookie dough wouldn’t work. At least, it wouldn’t yield the chewy, flavorful cookie I was seeking. Adding that much liquid was bound to result in too-thick, cakey cookies, which I definitely didn’t want.

    I took a few notes from my experience with developing other high-liquid recipes (like my pumpkin cookies) and creatively reduced the liquid and water content in a few ways. We use only egg yolks (no whites) and brown the butter (to cook out the excess water), which takes the cookie to even higher heights. The end result is oft and chewy cookies that aren’t at all cakey and stay soft for days!

    What makes these cookies so amazing?

    • Sourdough discard adds unique depth and wonderful flavor (it’s not at all sour here) that’s hard to put your finger on, but so good. Like… so good.
    • Browned butter imparts a rich, nutty taste that is unparalleled.
    • Chopped chocolate and sea salt accents the other flavors perfectly.

    What You Need

    Overhead view of ingredients including butter, sourdough discard, eggs, chocolate bars, and more.

    Here are the key ingredients in these sourdough discard chocolate chip cookies:

    • Sourdough discard. If you use my sourdough starter recipe, the amount you will discard there is the exact same amount needed here today. Saving sourdough discard for other recipes (like my sourdough pancakes!) is a wonderful way to reduce food waste (and a great excuse to eat more cookies)!
    • Butter. To compensate for the discard and reduce the water content in the dough, we’ll brown our butter. This extra step creates an AMAZING flavor as well, so it’s worth it. If you’ve never browned butter before, I have a post on how to brown butter that might be helpful for you.
    • Egg yolks. Discarding the egg whites and just using the yolks also helps to reduce the water in our cookie dough.
    • Chocolate. Semisweet or 60% cacao chocolate baking bars are my preference in this recipe. You can use whatever type of chocolate you prefer though, such as semisweet, milk, or dark chocolate. Despite these being sourdough discard chocolate chip cookies, I recommend buying bars and chopping them yourself (like I do with my brown butter chocolate chip cookies). This allows the chocolate to distribute beautifully through the cookies and melt more than regular chocolate chips would. It just also adds to that gourmet feel! Yes, of course actual chips will work instead, but I do recommend you try them with chopped chocolate at least once.
    • Vanilla extract. This also adds depth of flavor to the cookies. If you have homemade vanilla, now is the time to whip it out.
    • Sea salt. Adding a sprinkle of flaky sea salt on top of the baked cookies enhances the sweet and savory flavors, creating a delightful contrast.

    SAM’S TIP: I think these sourdough discard chocolate chip cookies taste best when the dough has had quite a bit of time to chill; in fact, I like to let mine sit overnight before scooping and baking. Technically the dough will be firm enough that you can bake it right away (the cookies would just be a smidge flatter), but if you have the patience to let the flavor develop, you will be rewarded with amazing cookies!

    Remember, this is just an overview of the ingredients I used and why. For the full recipe please scroll down to the bottom of the post!

    How to Make Sourdough Chocolate Chip Cookies

    Collage of four photos showing chocolate chip cooking doing being prepared with brown butter.
    1. Brown the butter – Cook the butter over medium low heat until it melts, then increase the heat to medium. Stir constantly as the butter bubbles and pops (it’s the most pleasant sound in the world). Once the popping slows, look for golden brown specks forming in the bottom of the pan. Remove from the heat, pour into a heatproof bowl, and let cool completely.
    2. Add the wet ingredients – Add the sugars, egg yolks, and vanilla to the cooled butter, then stir in the sourdough discard.
    3. Add the dry ingredients – Whisk together the dry ingredients in a separate bowl, then gradually stir them into the wet ingredients.
    4. Chocolate and chill – Add the chopped chocolate and fold it into the dough until incorporated. Cover the bowl with plastic wrap and place in the fridge to chill for at least 30 minutes (I like to let mine chill overnight for the best flavor).
    Collage of two photos showing cookie dough being scooped onto a baking sheet and baked.
    1. Scoop and bake – Roll 1 ½ tablespoon sized cookie dough balls between your palms before placing on a parchment lined baking sheet. Bake for 350F for 10-12 minutes, or until the edges start to turn golden brown.
    2. Salt and enjoy! Sprinkle the warm cookies with sea salt and let them cool completely on their baking sheets before enjoying.

    SAM’S TIP: Never put cookie dough on a hot cookie sheet! Doing this can cause your dough to spread and result in super thin cookies. If you don’t have multiple cookie sheets, let your dough chill in the fridge in between batches while your cookie sheets cool down.

    Overhead view of chocolate chip cookies made with sourdough discard on a baking sheet after baking.

    Frequently Asked Questions

    Can I make the dough in advance?

    Yes! In fact, I think these sourdough chocolate chip cookies tastes best after chilling the dough overnight. You can make this dough up to 4 days in advance, just note that if you do chill it longer than 60 minutes, it will be a bit tough to scoop at first (just let it sit at room temperature until scoopable).

    What does sourdough do in cookies?

    I developed these sourdough discard chocolate chip cookies as a way to 1) use my sourdough discard instead of discarding it and 2) create an incredibly flavored cookie that’s a bit different from the norm.

    No matter the recipe type, sourdough discard imparts flavor and also has some nutritional benefits too. That’s not to say these cookies should be considered health food though!

    Can I freeze this cookie dough?

    Yes! Follow the chilling step first, then freeze according to the instructions for drop cookies in my how to freeze cookie dough post.

    Sourdough chocolate cookies on a cookie sheet after baking.

    More Ways to Use Sourdough Discard:

    • Slice of sourdough chocolate cake with a bite missing.
      Sourdough Chocolate Cake
    • Sourdough peanut butter cookies with sugared tops on brown parchment paper.
      Sourdough Peanut Butter Cookies
    • Two sourdough oatmeal cookies beside a cooling rack of more cookies.
      Sourdough Oatmeal Cookies
    • Bite missing from a slice of sourdough coffee cake on a white plate.
      Sourdough Coffee Cake

    I seriously can’t wait for you to try these!

    Enjoy!

    Let’s bake together! I’ll be walking you through all the steps in my written recipe and video below! If you try this recipe, be sure to tag me on Instagram, and you can also find me on YouTube and Facebook

    Sourdough chocolate cookies on a cookie sheet after baking.

    Sourdough Chocolate Chip Cookies

    These sourdough chocolate chip cookies are made with brown butter, semisweet chocolate, and a sprinkle of sea salt. They have an incredible flavor and are perfect for using up sourdough discard!
    Recipe includes a how-to video!
    4.95 from 203 votes
    Print Pin Rate
    Prevent your screen from going dark
    Course: cookie, Dessert
    Cuisine: American
    Prep Time: 15 minutes minutes
    Cook Time: 10 minutes minutes
    Chilling Time: 30 minutes minutes
    Servings: 24 cookies
    Calories: 253kcal
    Author: Sam Merritt

    Ingredients

    • 1 cup (226 g) unsalted butter
    • 1 cup (200 g) light brown sugar firmly packed
    • ⅔ cup (133 g) granulated sugar
    • 2 large egg yolks room temperature preferred
    • 1 ½ teaspoons vanilla extract
    • ⅔ cup (140 g) sourdough discard
    • 2 ¾ cup (340 g) all-purpose flour
    • 1 teaspoon baking powder
    • 1 teaspoon baking soda
    • ¾ teaspoon salt
    • 1 ½ cups (255 g) semisweet chocolate chips or 6 oz chopped semisweet or dark chocolate bar
    • Flaky sea salt for sprinkling

    Recommended Equipment

    • Baking sheet
    • Mixing bowls
    • 1 ½ Tbsp cookie scoop

    Instructions

    • Brown the butter. In a saucepan, melt butter over medium-low heat. Increase heat to medium and cook, stirring constantly. Butter will sizzle and pop. Once popping slows or stops and you notice the butter is beginning to turn golden brown (there will be brown flecks on the bottom of your pan) immediately remove from heat. Pour into a large heatproof mixing bowl and allow to cool until no longer warm to the touch before proceeding.
      1 cup (226 g) unsalted butter
    • Once butter has cooled, add sugars, eggs yolks, and vanilla extract and stir until well-combined.
      1 cup (200 g) light brown sugar, ⅔ cup (133 g) granulated sugar, 2 large egg yolks, 1 ½ teaspoons vanilla extract
    • Add sourdough discard and mix well, until fully incorporated.
      ⅔ cup (140 g) sourdough discard
    • In a separate bowl, whisk together the all-purpose flour, baking powder, baking soda, and salt.
      2 ¾ cup (340 g) all-purpose flour, 1 teaspoon baking powder, 1 teaspoon baking soda, ¾ teaspoon salt
    • Gradually add the dry ingredients to the wet, stirring until thoroughly combined.
    • Use a spatula to fold in chopped chocolate until well incorporated.
      1 ½ cups (255 g) semisweet chocolate chips or 6 oz chopped semisweet or dark chocolate bar
    • Cover with plastic wrap and chill for at least 30-60 minutes (or, my preference, overnight).
    • Once dough is ready to bake, preheat oven to 350F (175C) and line a baking sheet with parchment paper.
    • Scoop chilled dough into 1 ½ Tablespoon-sized balls, for neat, uniform cookies roll between your palms to make them round. Place on prepared baking sheet, spacing cookies at least 2 inches apart.
    • Bake for 10-12 minutes, until edges are beginning to turn golden brown (centers will still be soft and may appear slightly underdone).
    • Within several minutes of removing cookies from oven, sprinkle all over with flaky sea salt.
      Flaky sea salt
    • Allow cookies to cool completely on baking sheet before removing and enjoying.

    Notes

    Storing

    Store cooled cookies in an airtight container at room temperature for up to a week.

    Nutrition

    Serving: 1cookie | Calories: 253kcal | Carbohydrates: 33g | Protein: 3g | Fat: 13g | Saturated Fat: 8g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 3g | Trans Fat: 0.3g | Cholesterol: 37mg | Sodium: 137mg | Potassium: 96mg | Fiber: 1g | Sugar: 19g | Vitamin A: 264IU | Calcium: 33mg | Iron: 2mg

    Nutritional information is based on third-party calculations and should be considered an estimate only. Actual nutritional content will vary based upon brands used, measuring methods, cooking method, portion sizes, and more.

    Tried this recipe? Show me on Instagram!Mention @SugarSpun_Sam or tag #sugarspunrun!

    More Dessert Recipes

    • Several halves of choc-oat-chip cookies stacked on top of each other.
      Choc-Oat-Chip Cookies (Chocolate Chip Cookies with Oats)
    • Overhead view of peanut butter cookies next to a bowl of peanut butter on a parchment lined baking sheet.
      The Best Peanut Butter Cookie Recipe (Soft & Buttery)
    • Chocolate strawberry cake decorated with a pink strawberry frosting and a ganache drip.
      Chocolate Strawberry Cake
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    Reader Interactions

    Comments

    1. Raul

      February 25, 2026 at 8:02 pm

      5 stars
      My wife loved them, if I do say so myself.Followed the recipe exactly. Make friends with these cookies for sure.

      Reply
    2. Jolene

      February 22, 2026 at 9:54 pm

      5 stars
      These cookies are amazing!
      Can you freeze the dough?

      Reply
      • Sam Merritt

        February 23, 2026 at 11:29 am

        Thank you so much for trying my recipe, Jolene! I’m so glad you enjoyed the cookies so much! You shouldn’t have any issues freezing this dough. 🙂

        Reply
    3. Kimberly Button

      February 22, 2026 at 8:32 pm

      5 stars
      Thank you so much for this recipe. I’ve been making it for a few years now and everyone always loves it and/or wants the recipe. One of my friends will hoard them for herself.=) I have not had any luck browning butter so I just cream it and the recipe still is amazing! I always double it. One thing I’ve done for about a year or so now is use 5 cups of flour instead of 5 1/2 cups and then add 1/2 unsweetened cocoa powder. Wowzers!!

      Reply
    4. Bernadette Dickson

      February 18, 2026 at 4:22 pm

      5 stars
      This recipe is great, so delicious! It’s my first cookie dough using sourdough starter, yum!
      My only issue was I chilled the dough for two hours and my cookie scoop wouldn’t go through it while, it crumbled. But I molded them into balls and I worked out just fine. I just wondered do you have to refrigerate it at all? I will be making these again soon thank you for sharing and I look forward to trying some of your other sourdough recipes. Thank you.

      Reply
      • Sam Merritt

        February 19, 2026 at 9:28 pm

        Thank you so much for trying my recipe, Bernadette. The conditions in your kitchen may be suitable that you could get away without chilling it at all, but it could be risky and they could spread. You can always do a test cookie or two. I recommend at least 30 minutes chilling. 🙂

        Reply
      • Erin

        February 21, 2026 at 9:56 pm

        Can I make a raw batch in advance and freeze it to bake later?

        Reply
        • Sam Merritt

          February 23, 2026 at 2:29 pm

          Hi Erin! That should work just fine. 🙂

    5. Janelle

      February 08, 2026 at 3:28 pm

      5 stars
      Taste is great! My cookies don’t spread as much when they bake. Am I doing something wrong?

      Reply
      • Sam Merritt

        February 10, 2026 at 9:31 pm

        I’m glad you’ve ultimately enjoyed them, Janelle! Are you weighing your flour? Are you making any substitutions?

        Reply
        • Janelle

          February 12, 2026 at 1:55 pm

          I’m measuring my flour in cups. No substitutions.

        • Sam Merritt

          February 16, 2026 at 2:22 pm

          You may be accidentally over-measuring your flour slightly. 🙁 It’s very easy to do when using cups. I do have an article on how to measure flour that may be helpful. If you can convert to weighing it makes life so much easier, in my opinion. Happy baking! 🙂 🙂

        • Renee

          February 22, 2026 at 7:04 pm

          Will milk chocolate morsels work instead of semi- sweet?

        • Sam Merritt

          February 23, 2026 at 12:08 pm

          Sure thing! 🙂

      • Cynthia

        February 13, 2026 at 5:25 pm

        5 stars
        these are delicious!
        I’ve made them 3x now. family can’t get enough of them.
        my only question is this: the last time I made them I refrigerated overnight light the tip says. the dough was super hard and I had to wait awhile for it to warm a little so I could put them on the cookie sheet. is that normal? if so, how long should I typically wait after refrigeration to scoop?

        Reply
        • Emily @ Sugar Spun Run

          February 16, 2026 at 1:48 pm

          Hi Cynthia! That is totally normal. How long it will take depends on how warm your kitchen is and how long the dough chilled; we just let the dough sit until it is scoopable 🙂

    6. Danielle

      January 31, 2026 at 11:28 am

      5 stars
      My favorite cookies! I add a little more baking powder since I like a fat chewy cookie plus pecans. They also freeze well so I can grab a couple when I need a sweet snack. Also keeps me from eating the whole batch too quickly.

      Reply
    7. Lesia Butler

      January 25, 2026 at 10:01 pm

      5 stars
      The perfect cookie, a little soft and a little crunchy. Not cakey like the other sourdough discard cookies I’ve tried!! Absolute perfection.

      Reply
    8. Cortnee Wright

      January 11, 2026 at 11:30 am

      5 stars
      I make these all the time and EVERYONE loves them! I even ship them to another state for a friend! ❤️

      Reply
    9. Suzanne

      December 30, 2025 at 7:29 pm

      5 stars
      I was hoping not to love these as much as my traditional chocolate chip cookies due to the add’l work (browning the butter, chopping the chocolate, etc.), but oh, my goodness, these are our new favorites. Even tastier than the Mrs. Fields deluxe chocolate chip cookies with ground oats and semisweet chocolate.

      Reply
    10. Angel

      December 25, 2025 at 4:30 pm

      5 stars
      great recipe, I needed to bake mine about 2 min longer

      Reply
    11. Sonya

      December 23, 2025 at 7:27 pm

      5 stars
      The best recipe and everyone wants more

      Reply
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    4.95 from 203 votes (34 ratings without comment)

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    The author (Sam) in blue shirt holding Fudge round cookie with blue mixer in background Hi, I'm Sam! I'm dedicated to bringing you sweet, simple, and from-scratch dessert recipes. My life may or may not be controlled by my sweet tooth. Send help (or chocolate). Read more about me.

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