4.96 from 49 votes

Black Bottom Cupcakes

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Servings: 24 cupcakes

41 mins

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This is an old-fashioned recipe for classic Black Bottom Cupcakes! This is my grandmother’s recipe that I’ve been making and enjoying since I was a kid! It has a fudgy chocolate base and a rich cheesecake center loaded with mini chocolate chips! A chocolate-lover’s dream!

black bottom cupcake on wood cutting board

Black Bottom Cupcakes

A few weekends ago I spent the afternoon at my grandmother’s house rooting through a giant shoebox of old recipes, as well as half a dozen of her favorite old cookbooks.

It. Was. HEAVEN.

Yellowed page after yellowed page of well-loved, butter-stained recipes, some hand-written and some typed. Favorite recipes I grew up enjoying and still love when she has a Sunday dinner from time to time. I left with dozens of recipes that I am so excited to share with you throughout the rest of the year.

First up is these Black Bottom Cupcakes. I don’t know about you, but I lived for Black bottom cupcakes (or “black bottoms”, as we usually called them) as a kid. They’re surprisingly simple to make with an egg-free cupcake base. They’re low-maintenance (no frosting required) and humble in appearance, but so rich, decadent, and packed with flavor. With their fudgy cupcake bottoms and creamy cheesecake tops, they’re one of my favorite simple treats (like a cross between a chocolate cupcake and a mini cheesecake!)

Two images: Black bottom ingredients (left), black bottom batter (right)  Ingredients for making black bottom cupcake batter

How to Make Black Bottoms

  1. Make your cheesecake topping first. Stir the cream cheese and sugar together until well-combined and smooth (if you have softened the cream cheese enough you might be able to do this by hand, otherwise use an electric mixer). Add an egg, salt, and vanilla extract and stir everything together again. Finally, fold in mini chocolate chips.
  2. Prepare your cupcake batter! Whisk together dry ingredients, then stir in the remaining wet ingredients.
  3. Portion out your batters. Scoop some chocolate cupcake batter into a cupcake tin that’s been lined with paper or foil liners. Fill each liner only 1/3 of the way full. Dollop 1 1/2 Tablespoons of cheesecake filling into the top center of each cupcake.
  4. Bake until cheesecake is set and cupcakes are cooked through. Don’t over-bake or the cupcake portion will be dry and the cheesecake texture will deteriorate. Allow black bottoms to cool completely before enjoying. Personally I prefer mine when they have cooled completely and have been chilled in the refrigerator.

Adding cheesecake batter on top of cupcake batter to make black bottoms

Be Careful How Much You Fill Your Cupcake Liners

Typically, black bottoms should have black bottoms (shocking, right?) and slightly sunken, decadent cheesecake tops. These were the black bottoms of my childhood and every church potluck.

In order to achieve this, make sure that you do not over-fill your cupcake liners with chocolate cupcake batter. A third of the way full is sufficient, and if you fill the liners any further, the chocolate cupcake batter will swell up over the cheesecake filling and swallow it up completely (Please see example cupcakes below: the top one was filled halfway and the bottom one was filled properly, or 1/3 full).

Also, you want a nice ratio of cupcake to cheesecake. If you have too much cupcake batter it overwhelms the flavor of the cheesecake.

A black bottom cupcake that has been overfilled (top) and a black bottom cupcake that has been filled properly (below)

That being said!

Don’t panic if your cupcakes come out looking like the first cupcake! That cheesecake topping is still in there, it’s just a filling now instead of a topping. All is not lost, they just don’t look as traditional as they ought too.

Also, Zach thought that my black bottom “successes” were actually the fails. Since he’s usually allowed to eat as many recipe fails as he wants, I had almost had a heart attack when I caught him chowing down on one of my most perfect successful cupcakes. In his opinion, the fails were the pretty ones!

Pretty easy to see he didn’t grow up eating black bottom cupcakes! 🤦🏼‍♀️

Black bottom cupcake with a bite out of it, showing cheesecake center

Enjoy!

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Let’s bake together! Be sure to check out my video at the bottom of the recipe where I’ll show you exactly how I make these Black Bottom Cupcakes in my own kitchen! If you enjoy watching, make sure to subscribe to my YouTube channel where I’ve already uploaded over 150 recipe videos that you can watch for free!

Black bottom cupcakes on marble surface
4.96 from 49 votes

Black Bottom Cupcakes

An old fashioned recipe for black bottom cupcakes! This recipe makes soft, chocolatey cupcakes with a rich cream cheese center!
Be sure to check out the how-to VIDEO just below the recipe!
Prep: 25 minutes
Cook: 16 minutes
Total: 41 minutes
Servings: 24 cupcakes
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Ingredients

Cream Cheese Filling:

  • 8 oz cream cheese, softened
  • cup (66 g) granulated sugar
  • 1 large egg
  • teaspoon salt
  • ¼ teaspoon vanilla extract
  • 1 cup (170 g) mini chocolate chips

Bottoms:

  • 1 ½ cups (190 g) all-purpose flour
  • 1 cup (200 g) granulated sugar
  • cup (31 g) natural unsweetened cocoa powder
  • 1 teaspoon baking soda
  • ½ teaspoon salt
  • 1 cup milk¹
  • cup (80 ml) avocado, canola or vegetable oil, (80ml)
  • 1 Tablespoon white vinegar
  • 1 teaspoon vanilla extract

Instructions 

  • Preheat oven to 350F (175C) and line two 12-count muffin tins with paper liners. Set aside.
  • Prepare cream cheese filling first by stirring together cream cheese and sugar until well-combined and not lumpy. Stir in egg, salt, and vanilla extract until completely combined.
    8 oz cream cheese, ⅓ cup (66 g) granulated sugar, 1 large egg, ⅛ teaspoon salt, ¼ teaspoon vanilla extract
  • Stir in chocolate chips. Set aside.
    1 cup (170 g) mini chocolate chips

To prepare chocolate batter:

  • In a large bowl, whisk together flour, sugar, cocoa powder, baking soda, and salt.
    1 ½ cups (190 g) all-purpose flour, 1 cup (200 g) granulated sugar, ⅓ cup (31 g) natural unsweetened cocoa powder, 1 teaspoon baking soda, ½ teaspoon salt
  • Add milk, oil, vinegar, and vanilla extract and stir until batter is smooth and well combined.
    1 cup milk¹, ⅓ cup (80 ml) avocado, canola or vegetable oil, 1 Tablespoon white vinegar, 1 teaspoon vanilla extract
  • Evenly divide chocolate batter into prepared muffin tins, filling each liner only ⅓ full with batter.
  • Dollop 1 ½ Tablespoons of cheesecake batter onto the top of the chocolate batter in the center.
  • Transfer to 350F (175C) oven and bake for 16-18 minutes.
  • Allow to cool and then enjoy.

Notes

¹I mentioned that this is my grandmother's recipe, but I did deviate in one way. Her recipe called for 1 cup water. After a lot of taste testing I decided I liked it best with 1 cup of milk instead.
This recipe can be made into mini black bottom cupcakes. Fill liners of mini cupcake tin less than ½ full of chocolate batter then dollop 1-1 ½ teaspoons of cream cheese filling on top.Bake about 14-16 minutes. Will make 48 mini black bottoms.

Storing

I prefer these black bottoms when they are stored in the refrigerator (something about liking my cheesecake cold!). Make sure you store them in an airtight container so they don’t dry out!

Nutrition

Serving: 1cupcake | Calories: 151kcal | Carbohydrates: 20g | Protein: 2g | Fat: 7g | Saturated Fat: 3g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 3g | Cholesterol: 19mg | Sodium: 152mg | Potassium: 42mg | Fiber: 1g | Sugar: 13g | Vitamin A: 1500IU | Calcium: 110mg | Iron: 1.1mg

Nutrition information is automatically calculated, so should only be used as an approximation.

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111 Comments

  1. Tillie says:

    5 stars
    Made these cupcakes today witth my little brother, my whole family loves them! Great cupcakes.

    1. Sam says:

      I am so glad everyone enjoyed them so much, Tillie! 🙂

      1. Kathy says:

        5 stars
        All time favorite! I’ve been making these for 35+ years using an old family recipe. I was recently asked to share the recipe and the paper was so tattered and stained I was embarrassed to copy it. I was happy to find your recipe online with the exact ingredients to print out! I did appreciate your notes and will use milk the next time I bake them. Being a chocoholic I usually stick to the original recipe however for a recent holiday I made them with red velvet cake batter. Big hit! Will definately check out your other recipes!

      2. Emily @ Sugar Spun Run says:

        Thanks for sharing our recipe, Kathy! We’ll have to experiment with a red velvet version–that sounds divine 😋

  2. Lori says:

    5 stars
    Just made these for the first time and OMGGG how can these NOT be delicious!! I recently discovered your website and have made four of the recipes and they have all turned out SO DAMN GOOD!! 🙂

    1. Sugar Spun Run says:

      Thank you so much for trying so many of my recipes, Lori! I am so glad that you have enjoyed them, including these cupcakes. Thanks for being a fan! 🙂

  3. Natalie E Stalcup says:

    5 stars
    These are superb! I used coffee extract , instead of vanilla, and they were delicious. That was the only change I made.

    1. Sugar Spun Run says:

      I am so glad that you enjoyed them, Natalie! Thank you for trying my recipe and for commenting. 🙂

  4. Julie says:

    5 stars
    The cupcakes came out great!

    1. Sam says:

      I’m so glad you enjoyed the cupcakes so much, Julie! 🙂

  5. Julie says:

    I haven’t made these in years and am excited to make them again. I happen to have whey left over from making ricotta cheese. How will this do instead of water? Also, you mentioned that the will stay for a week in the fridge. Try freezing them. I have eaten them frozen with ice cream and chocolate syrup. Very decadent!

    1. Sugar Spun Run says:

      I am excited for you to try my recipe, Julie! Unfortunately, I am not familiar with using whey so I can not provide you with any personal recommendations. I agree… freezing them works well. I haven’t tried them with ice cream but now I need too. Enjoy! 🙂

  6. Jasmine says:

    Hi, will olive oil ruin the flavour? I also have coconut oil… but im not sure how much it’ll alter the flavour

    1. Sugar Spun Run says:

      Hi, Jasmine! Yes, both olive oil and coconut oil will alter the taste and texture of the cupcakes. You want to use a neutral like canola or vegetable for the best results.

  7. Sofia says:

    Very excited to try this recipe! I’ve seen others use coffee instead of water, and I know it’s often used in chocolate things, so I thought I would try it. Do you think it would be okay to replace all of the milk with coffee, or try more of a half coffee, half milk approach?

    1. Sugar Spun Run says:

      Hi, Sofia! I have not tried it, however, I do not recommend replacing all of the milk with coffee. If you wish to experiment, I would start with 1/2 coffee and 1/2 milk. Keep me posted on how it turns out. 🙂

  8. Curly says:

    5 stars
    I did it! Great cupcakes!!!! John

    1. Sugar Spun Run says:

      I am so glad that you enjoyed the black bottom cupcakes, John. Thanks for commenting. 🙂

  9. Ash says:

    Hello! I just wanted to say thank you so much for this recipe! I’ve never had black bottoms but my sister requested them for her birthday, since she fondly remembers them from elementary school.

    I tried another recipe off a different site, and they were awful and dry. I thought, “who would like these??” Lol! But thankfully I found your site and this recipe completely changed my mind!

    You include notes that are super important, and imho make the cupcakes exactly how they should be – fudgy, creamy and delicious, no frosting needed! Like in your notes, they key is:

    – Do NOT overbake. 16ish min is more than enough. These are supposed to be dense and creamy not dry.

    – You NEED the choc chips! Do NOT omit them! I made a 1st batch with another recipe without them and the choc chips really add to the fudgy-ness. They sink to the bottom and help make the cake moist.

    – Definitely use milk instead of water! Water dries it out too much. I used whole milk and they were perfect.

    – Don’t overfill your cups! Like the recipe says, you only need a 1/3 full of batter because the cheesecake part takes up a lot of space.

    – I only used 1 tbs of cheesecake filling because I kinda over filled mine at first lol.

    – They will puff up when cooking and deflate after you take them out, this is normal.

    – They are best cold just like the recipe says! Refrigerate after they cool a bit.

    Also, I weighed all my ingredients per the recipe. The batter tasted great.

    I don’t care for cheesecake, but I LOVED these. Thank you for showing me what all the fuss was about! I’ll definitely make them again!

    1. Sugar Spun Run says:

      I am so happy you stumbled onto my site, Ash! Thank you for trying my recipe! I am so happy to hear how much you enjoyed the black bottom cupcakes. The notes and tips are there to help and I am so glad that they did! Thanks again! I hope that you try more of my recipes. 🙂

  10. Deborah Way says:

    How long do black bottoms last if kept in the refrigerator?

    1. Sugar Spun Run says:

      Hi, Deborah! They should be good for up to one week. I hope that you enjoy them! 🙂

  11. Jeremy says:

    5 stars
    My grandmother always made these and sent them to me for Christmas. I decided to learn to make my own so I could make them anytime and when I did, I tried a few variations but one that I loved was substituting Caramel chips for the chocolate chips. OMG delicious!!!!! Tried peanut butter chips as well and they were good but the caramel ones were better.

    1. Sam says:

      Yum! Love the sound of the caramel chips in the black bottoms, going to have to try that myself! Thanks for commenting, Jeremy!

  12. Valerie L. says:

    5 stars
    I have been making these scrumptious cupcakes for so many years that I have lost count as to just how many I have made. Everyone whom I have ever made them for has always loved them. However, before I put them in the oven, I sprinkle either some finely chopped walnuts or pecans on top, as well as a very light sprinkle of granulated sugar.

    1. Sam says:

      I love the sound of both of those additions!! Yum! Thank you for commenting, Valerie 🙂

  13. Joanne says:

    Most of the older Grandma recipes are the best! I did not grow up with these cupcakes so will be trying soon.

    1. Sam says:

      Aren’t they, though!? I hope you love these black bottom cupcakes, Joanne! 🙂

  14. Hallie says:

    I love these! My grandmother made them as well- they are the best!

    1. Sam says:

      Aren’t they though!?

  15. Barbara J Kniefel says:

    These are great I have made them with half milk and half water. Also I Frost with cream cheese frosting or chocolate fudge frosting. They’re great anyway you make them. But yes refrigerated is Best. Thank you

    1. Sam says:

      You are very welcome! Thanks for commenting, Barbara! 🙂